Sequence and Structural Bioinformatics
Computational
methods
for
biological
sequence,
structure
and
systems
analysis.
The
use
of
Hidden
Markov
Models
for
functional
identification
of
proteins
has
been
pioneered
through
the
development
of
HMM-ModE.
Methods
that
improve
small
molecule
docking
scores,
cheminformatics
using
data-mining
methods,
simulations
of
macromolecular
systems
and
analysis
of
high-throughput
data
from
biological
experiments is the current focus of the lab in this area.
The
group
is
also
actively
involved
in
the
CSIR-lead
Open
Source
Drug
Discovery
(OSDD)
project,
within
which
the
group
manages
responsibilities
associated
with
the
technical
infrastructure
and
project
management
through
the
Technical,
Science
and
Budget
committees.
The
group
supports
OSDD
access
to grid infrastructure, and provides methods for target, as well as ligand, based lead identification.
Currently we are working in the following areas
•
Automated Protein Functional Annotation
•
NGS data analysis
•
Biocomputing, CyberInfrastructure and Cloud Computing
•
Molecular Dynamic Simulations and Free Energy Calculations using Gromacs
•
Data mining in Chemoinformatics
© 2015, Dr. Andrew M. Lynn, SC&IS, JNU Developed by : Sudhir Patwal
CONTACT PERSON
Prof. Andrew M. Lynn
Professor
School of Computational and Integrative Sciences
(formerly known as School of Information Technology)
Jawaharlal Nehru University, New Delhi 110067
INDIA
Fax: +91-11-26704172
E-mail: andrew@jnu.ac.in
RESEARCH
Recent PUBLICATIONS
PRINCIPAL INVESTIGATOR
Prof. Andrew M. Lynn
Professional Experience
•
Professor & DEAN, School of Computational and Integrative Sciences, JNU, 2016
•
Associate Professor, School of Computational and Integrative Sciences, JNU, 2007-2012
•
Assistant Professor, School of Information Technology, JNU, 2001-2007
•
Research Associate, Bioinformatics Center, Jawaharlal Nehru University, 2000-2001
•
Research Scientist, International Center for Genetic Engineering and Biotechnology, 1998-1999
Other Experience
•
Member: Board of Studies, Banasthali Vidyapeeth, 2007-date
•
Member: Board of Studies, Central University of Bihar, 2013-date
•
Member: Board of Studies MMV, Bioinformatics; Banaras Hindu University, 2010 – 2014
•
Member: Board of Studies: Computational Biology, Pondicherry University, 2011 – 2015
•
Member : PSRG National Resource Center for Free and Open Source Software Ministry of
Communication and Information Technology, 2009-date
Education
•
M.Sc. Biotechnology, Goa University, 1991
•
PhD, Life Sciences, Jawaharlal Nehru University, 1998
Andrew M. Lynn
Professor
